Pre_GI: BLASTP Hits

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Query: NC_012578:1838470:1875554 Vibrio cholerae M66-2 chromosome I, complete sequence

Start: 1875554, End: 1876075, Length: 522

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:1688500:171856617185661719087522Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system small permease component1e-95348
NC_009457:1444449:148152414815241482045522Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-95348
NC_017270:1755552:176717217671721767681510Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, small permeasetransporter4e-93340
NC_016445:1363831:139982113998211400330510Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-93340
NC_020302:85821:130639130639131205567Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein6e-1476.6
NC_014041:3197192:320268832026883203158471Zunongwangia profunda SM-A87 chromosome, complete genomemembrane protein6e-1270.1
NC_017082:3717939:3719614371961437215091896Bradyrhizobium sp. S23321, complete genomeputative TRAP-type C4-dicarboxylate transport system1e-1065.9
NC_007503:1111457:116032211603221160825504Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctQ subunit6e-1063.5
NC_014323:4355266:4370785437078543726681884Herbaspirillum seropedicae SmR1 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system dctQ-M fusion permease large permease7e-0960.1
NC_011894:3161289:3176689317668931785871899Methylobacterium nodulans ORS 2060, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit1e-0859.3
NC_020908:1920169:193119919311991931687489Octadecabacter arcticus 238, complete genomeputative TRAP transporter DctQ component4e-0857.4
NC_013855:558831:5716875716875735791893Azospirillum sp. B510 plasmid pAB510a, complete sequenceTRAP C4-dicarboxylate transport system permease DctM subunit7e-0856.6
NC_015573:162000:173262173262173816555Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTripartite ATP-independent periplasmic transporter DctQ component1e-0756.2
NC_004463:2344128:2345192234519223470841893Bradyrhizobium japonicum USDA 110, complete genomeprobable ABC transporter permease protein2e-0755.1
NC_017249:7917586:7935099793509979368981800Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0755.1
NC_015145:92397:121083121083121694612Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeTRAP-type C4-dicarboxylate transporter, small permease5e-0753.9
NC_014532:2989185:300195530019553002422468Halomonas elongata DSM 2581, complete genomeTRAP transporter small transmembrane protein7e-0753.5
NC_013223:2609697:263816726381672638694528Desulfohalobium retbaense DSM 5692, complete genomeTripartite ATP-independent periplasmic transporter DctQ component8e-0753.1
NC_014364:4488875:451039345103934510887495Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeTripartite ATP-independent periplasmic transporter DctQ component7e-0753.1
NC_016513:1761830:176971917697191770126408Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative tripartite ATP-independent periplasmic transporter, DctQ component1e-0652.8
NC_014624:2668157:271831627183162718933618Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0652.4
NC_020911:18500:372623726237783522Octadecabacter antarcticus 307, complete genomeTRAP transporter small permease subunit DctQ2e-0652
NC_004193:3530000:354022835402283540734507Oceanobacillus iheyensis HTE831, complete genomeC4-dicarboxylate transport system permease small protein4e-0650.8
NC_015914:2230076:225333822533382253799462Cyclobacterium marinum DSM 745 chromosome, complete genomeTripartite ATP-independent periplasmic transporter DctQ component4e-0650.8