Pre_GI: BLASTP Hits

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Query: NC_011989:2549252:2563810 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2563810, End: 2565369, Length: 1560

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018000:2816637:2829079282907928361557077Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein9e-90331
NC_016616:1861852:1861852186185218664204569Dechlorosoma suillum PS chromosome, complete genomehypothetical protein2e-63243
NC_011916:2967624:2971567297156729735311965Caulobacter crescentus NA1000 chromosome, complete genomeice nucleation protein1e-41171
NC_002696:2941644:2945587294558729475511965Caulobacter crescentus CB15, complete genomehypothetical protein1e-41171
NC_007335:672847:6833446833446879754632Prochlorococcus marinus str. NATL2A, complete genomehypothetical protein1e-40167
NC_008819:85539:8553985539902934755Prochlorococcus marinus str. NATL1A, complete genomehypothetical protein2e-40167
NC_007335:672847:6763826763826818475466Prochlorococcus marinus str. NATL2A, complete genomehypothetical protein2e-32140
NC_005070:2181000:2197435219743522034796045Synechococcus sp. WH 8102, complete genomehypothetical protein1e-21105