Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1638261 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1638261, End: 1642955, Length: 4695

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011004:3582078:3600241360024136027902550Rhodopseudomonas palustris TIE-1, complete genomehypothetical protein4e-158560
NC_007493:1672163:1680503168050316839643462Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein5e-82307
NC_009049:627000:6460876460876498483762Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencehypothetical protein2e-78295
NC_014217:16398:2010520105227082604Starkeya novella DSM 506 chromosome, complete genomehypothetical protein2e-44182
NC_011894:3623500:36406163640616365118110566Methylobacterium nodulans ORS 2060, complete genomeFibronectin type III domain protein3e-28129
NC_013446:1648556:1648556164855616551316576Comamonas testosteroni CNB-2, complete genomePhage-related protein tail component-like protein4e-23111
NC_011894:3319856:3351880335188033531571278Methylobacterium nodulans ORS 2060, complete genomehypothetical protein2e-1999.4
NC_017322:1360764:1384333138433313870862754Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein2e-1999
NC_011894:3319856:335103633510363351899864Methylobacterium nodulans ORS 2060, complete genomehypothetical protein3e-1689
NC_011420:69843:7082870828722581431Rhodospirillum centenum SW, complete genomephage tail protein, putative7e-1584.3
NC_016641:5877164:5877164587716458828965733Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-0863.5
NC_020908:4093560:4105080410508041076712592Octadecabacter arcticus 238, complete genomeputative prophage-associated protein2e-0863.2