Pre_GI: BLASTP Hits

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Query: NC_011961:85083:106181 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 106181, End: 107512, Length: 1332

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013501:1881692:1892077189207718933421266Rhodothermus marinus DSM 4252, complete genomeCRISPR-associated protein, TIGR02710 family1e-58227
NC_019897:3251639:3269003326900332703521350Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein5e-27122
NC_000916:983500:9924709924709936721203Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein9e-22105
NC_007759:585264:6002696002696015071239Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein7e-1892.4