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Query: NC_011961:304158:327394 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 327394, End: 327651, Length: 258

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014974:1076565:108878110887811089032252Thermus scotoductus SA-01 chromosome, complete genomedihydrodiol dehydrogenase2e-1788.2
NC_014098:2971011:298138629813862981658273Bacillus tusciae DSM 2912 chromosome, complete genomedihydrodiol dehydrogenase2e-1787.8
NC_016604:3184855:321306932130693213287219Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein6e-1786.3
NC_009077:1725683:176484417648441765062219Mycobacterium sp. JLS, complete genomehypothetical protein2e-1684.7
NC_008705:1790222:183476918347691834987219Mycobacterium sp. KMS, complete genomeconserved hypothetical protein2e-1684.7
NC_016947:1480282:148086614808661481177312Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein3e-1167
NC_009077:1687304:170061817006181700923306Mycobacterium sp. JLS, complete genomehypothetical protein2e-1064.3
NC_014814:132404:144934144934145239306Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein3e-1063.9
NC_016604:3137694:315331531533153153620306Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein6e-1062.8
NC_008726:494769:507268507268507573306Mycobacterium vanbaalenii PYR-1, complete genomehypothetical protein1e-0962
NC_009338:686932:703149703149703454306Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-0961.6
NC_009338:603663:620195620195620500306Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-0961.6
NC_008705:1752180:176513917651391765444306Mycobacterium sp. KMS, complete genomehypothetical protein2e-0961.2
NC_014098:2332938:234383323438332344054222Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein9e-0855.5