Pre_GI: BLASTP Hits

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Query: NC_011094:3778000:3814572 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 3814572, End: 3815453, Length: 882

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015573:1045877:105371010537101054399690Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeZn-dependent hydrolase including glyoxylase2e-1583.2
NC_014500:2688095:2712267271226727132861020Dickeya dadantii 3937 chromosome, complete genomemetallo-beta-lactamase superfamily protein1e-1480.9
NC_016048:797762:808952808952809830879Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1273.2
NC_019908:2401577:244045224404522441282831Brachyspira pilosicoli P43/6/78 chromosome, complete genomemetallo-beta-lactamase5e-1168.6
NC_014330:768232:779862779862780653792Brachyspira pilosicoli 95/1000 chromosome, complete genomemetallo-beta-lactamase6e-1168.2
NC_018607:2111581:212284821228482123678831Brachyspira pilosicoli B2904 chromosome, complete genomemetallo-beta-lactamase2e-1066.6
NC_016935:4038265:404713840471384047863726Paenibacillus mucilaginosus 3016 chromosome, complete genomemetallo-beta-lactamase superfamily protein2e-0963.5
NC_015690:3477573:348890034889003489625726Paenibacillus mucilaginosus KNP414 chromosome, complete genomemetallo-beta-lactamase superfamily protein3e-0962.8
NC_015583:4879:1097410974119871014Novosphingobium sp. PP1Y plasmid Mpl, complete sequencebeta-lactamase domain-containing protein7e-0961.6
NC_021184:3259908:326765432676543268583930Desulfotomaculum gibsoniae DSM 7213, complete genomeZn-dependent hydrolase, glyoxylase1e-0757.4
NC_010681:1202929:122522812252281226019792Burkholderia phytofirmans PsJN chromosome 1, complete sequencebeta-lactamase domain protein3e-0755.8
NC_011000:2831183:284226928422692843060792Burkholderia cenocepacia J2315 chromosome 1, complete sequencemetallo-beta-lactamase superfamily protein6e-0652
NC_015711:6149615:6172517617251761739441428Myxococcus fulvus HW-1 chromosome, complete genomemetallo-beta-lactamase family protein8e-0651.2