Pre_GI: BLASTP Hits

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Query: NC_010572:6293417:6313787 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 6313787, End: 6315148, Length: 1362

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:1922930:1922930192293019242911362Streptomyces fulvissimus DSM 40593, complete genomeNYN_YacP domain containing protein7e-142504
NC_018750:2005229:2005229200522920065931365Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-125449
NC_014210:3742112:3759550375955037609651416Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF9014e-56219
NC_015514:2414617:2416738241673824180421305Cellulomonas fimi ATCC 484 chromosome, complete genomehypothetical protein5e-35149
NC_015671:1540860:1560118156011815614851368Cellvibrio gilvus ATCC 13127 chromosome, complete genomehypothetical protein7e-33142