Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1847552 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1847552, End: 1847896, Length: 345

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:2123819:212780721278072128151345Serratia marcescens WW4, complete genomehypothetical protein5e-33139
NC_016845:2306744:231332123133212313662342Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-25113
NC_014562:1844268:185377718537771854118342Pantoea vagans C9-1 chromosome, complete genomehypothetical protein3e-1167
NC_011741:2715246:273161627316162731969354Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-1062.4
CU928160:2715246:273161627316162731969354Escherichia coli IAI1 chromosome, complete genomeputative secreted protein from phage origin8e-1062.4