Pre_GI: BLASTP Hits

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Query: NC_009727:1542000:1549567 Coxiella burnetii Dugway 7E9-12, complete genome

Start: 1549567, End: 1550043, Length: 477

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Coxiella burnetii Dugway 5J108-111 was isolated from rodents in Utah, USA. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009085:131000:1375981375981414433846Acinetobacter baumannii ATCC 17978, complete genomeAmino acid adenylation8e-1269.3
NC_014259:3984568:3992186399218639961453960Acinetobacter sp. DR1 chromosome, complete genomenon-ribosomal peptide synthetase protein1e-1168.9
NC_017162:158289:1646221646221685813960Acinetobacter baumannii 1656-2 chromosome, complete genomeAmino acid adenylation2e-1168.2
NC_010410:3777076:3784698378469837886573960Acinetobacter baumannii AYE, complete genomeputative Non-ribosomal peptide synthetase2e-1167.8
NC_010611:154307:1608311608311647903960Acinetobacter baumannii ACICU, complete genomeNon-ribosomal peptide synthetase protein2e-1167.8
NC_011586:164746:1712291712291751883960Acinetobacter baumannii AB0057 chromosome, complete genomeamino acid adenylation2e-1167.8
NC_011595:3607402:3615024361502436189833960Acinetobacter baumannii AB307-0294, complete genomeTyrocidine synthetase 32e-1167.8
NC_017171:155836:1623131623131662723960Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomenon-ribosomal peptide synthetase protein2e-1167.8
NC_017387:147906:1543831543831583423960Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomenon-ribosomal peptide synthetase protein2e-1167.8
NC_016603:3259432:3266015326601532699743960Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomenon-ribosomal peptide synthetase, terminal component4e-1167
NC_008095:4189082:42203944220394423409713704Myxococcus xanthus DK 1622, complete genomenon-ribosomal peptide synthetase2e-1064.7
NC_013892:1890500:18981991898199192251024312Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylalanine racemase7e-0959.7
NC_015711:6522808:65228086522808654153618729Myxococcus fulvus HW-1 chromosome, complete genomenon-ribosomal peptide synthetase/polyketide synthase1e-0859.3
NC_014228:1929665:19314471931447194943117985Xenorhabdus nematophila ATCC 19061, complete genomeNon-ribosomal peptide synthetase2e-0858.2
NC_017030:3091313:31290853129085314133312249Corallococcus coralloides DSM 2259 chromosome, complete genomenon-ribosomal peptide synthetase2e-0858.2
NC_020126:6344827:6363701636370163689205220Myxococcus stipitatus DSM 14675, complete genomenon-ribosomal peptide synthetase4e-0857.4
NC_013892:2108175:21154932115493212622910737Xenorhabdus bovienii SS-2004 chromosome, complete genomepeptide synthetase XpsB4e-0857
NC_014623:9552:2685426854315994746Stigmatella aurantiaca DW4/3-1 chromosome, complete genometubf protein4e-0857
NC_004547:1683593:16835931683593170473921147Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenon-ribosomal peptide synthetase7e-0856.2
NC_015711:6796082:68133466813346682547712132Myxococcus fulvus HW-1 chromosome, complete genomenon-ribosomal peptide synthetase3e-0754.3
NC_020126:3383902:33920463392046341467722632Myxococcus stipitatus DSM 14675, complete genomenon-ribosomal peptide synthetase5e-0753.5
NC_020126:4974877:49748774974877499294218066Myxococcus stipitatus DSM 14675, complete genomenon-ribosomal peptide synthetase5e-0753.5
NC_012962:2587756:26228652622865263461811754Photorhabdus asymbiotica, complete genomeputative peptide/polyketide synthetase1e-0652.4
NC_008095:4858117:48754704875470488905613587Myxococcus xanthus DK 1622, complete genomenon-ribosomal peptide synthetase2e-0651.6
NC_014718:102852:1143111143111226328322Burkholderia rhizoxinica HKI 454 chromosome, complete genomeNon-ribosomal peptide synthetase modules3e-0650.8