Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2537557 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2537557, End: 2538942, Length: 1386

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010577:1188438:1188768118876811899281161Xylella fastidiosa M23, complete genomephage-associated protein, HI1409 family2e-45184
NC_004556:1178897:1179227117922711803871161Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-45184
NC_009255:1344000:1362849136284913643151467Burkholderia vietnamiensis G4 chromosome 2, complete sequencephage-associated protein1e-35150
NC_011001:1145508:1162044116204411636271584Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein5e-35149
NC_015437:1494777:1499239149923915011071869Selenomonas sputigena ATCC 35185 chromosome, complete genomephage-associated protein, HI1409 family6e-34145
NC_007712:3067000:3087352308735230887761425Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-33144
NC_009720:4033983:4047778404777840492321455Xanthobacter autotrophicus Py2, complete genomeHI1409 family phage-associated protein5e-33142
NC_003198:1908238:1908238190823819097041467Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-33142
NC_017033:1557981:1579903157990315812611359Frateuria aurantia DSM 6220 chromosome, complete genome1e-32141
NC_016845:1285435:1309788130978813113081521Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein6e-1375.9
NC_011283:4170369:4204453420445342059731521Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein7e-1375.5
NC_012967:786534:793631793631794392762Escherichia coli B str. REL606 chromosome, complete genomeputative bacteriophage protein4e-1273.2
NC_014121:3627588:3654059365405936555851527Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-1066.6
NC_003212:1713958:1736272173627217376571386Listeria innocua Clip11262, complete genomehypothetical protein4e-0963.2
NC_016935:6464201:6473095647309564744891395Paenibacillus mucilaginosus 3016 chromosome, complete genomephage-associated protein, HI1409 family1e-0758.5
NC_014724:1101950:1117350111735011187321383Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein1e-0655.1
NC_004556:1178897:119613011961301196420291Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-0653.9
NC_010577:1188438:120567012056701205945276Xylella fastidiosa M23, complete genomehypothetical protein3e-0653.9