Pre_GI: BLASTP Hits

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Query: NC_009654:4716417:4719432 Marinomonas sp. MWYL1, complete genome

Start: 4719432, End: 4720541, Length: 1110

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007963:814148:8173558173558184461092Chromohalobacter salexigens DSM 3043, complete genomeextracellular solute-binding protein, family 15e-49195
NC_014532:722151:7235517235517245791029Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein3e-45182
NC_010682:3313944:3359930335993033610721143Ralstonia pickettii 12J chromosome 1, complete sequenceextracellular solute-binding protein family 17e-44178
NC_010511:6756000:6756055675605567571191065Methylobacterium sp. 4-46 chromosome, complete genomeextracellular solute-binding protein1e-43177
NC_012856:3000839:3021390302139030225321143Ralstonia pickettii 12D chromosome 1, complete genomeextracellular solute-binding protein family 15e-43175
NC_015663:3742738:3765470376547037665581089Enterobacter aerogenes KCTC 2190 chromosome, complete genomeABC transporter periplasmic substrate-binding protein3e-40166
NC_014364:1990000:199138319913831992369987Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysR substrate-binding protein2e-0860.1