Pre_GI: BLASTN Hits

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Query: NC_009487:486000 Staphylococcus aureus subsp. aureus JH9 chromosome, complete

Start: 486000, End: 510389, Length: 24390

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: A series of isogenic methicillin-resistant (MRSA) strains were isolated from a patient undergoing vancomycin treatment. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
UCMB5137:38579603857960389056232603Bacillus atrophaeus UCMB-51371e-0869.9BLASTN svgBLASTP svg
NC_014479:18800918800920928521277Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_007622:41600041600043709921100Staphylococcus aureus RF122, complete genome04726BLASTN svgBLASTP svg
NC_002758:47551647551649964424129Staphylococcus aureus subsp. aureus Mu50, complete genome014710BLASTN svgBLASTP svg
NC_002745:45000045000047241122412Staphylococcus aureus subsp. aureus N315, complete genome011450BLASTN svgBLASTP svg
NC_007793:45904545904548230823264Staphylococcus aureus subsp. aureus USA300, complete genome013510BLASTN svgBLASTP svg
NC_010079:45894045894048167922740Staphylococcus aureus subsp. aureus USA300_TCH1516, complete013510BLASTN svgBLASTP svg
NC_004461:15647915647918151425036Staphylococcus epidermidis ATCC 12228, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002976:24348802434880246168326804Staphylococcus epidermidis RP62A, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_020164:892148921411523326020Staphylococcus warneri SG1, complete genome4e-107396BLASTN svgBLASTP svg