Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2470859 Pseudomonas mendocina ymp, complete genome

Start: 2470859, End: 2471596, Length: 738

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2751342:276627027662702767007738Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-100363
NC_011992:1912200:192209419220941922828735Acidovorax ebreus TPSY, complete genomehypothetical protein2e-82305
NC_008740:3520500:354110635411063541840735Marinobacter aquaeolei VT8, complete genomeputative ORF1 (plasmid pTOM9)6e-79293
NC_010943:9294:336573365734388732Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein5e-74277
NC_016616:1182125:118528011852801186023744Dechlorosoma suillum PS chromosome, complete genomehypothetical protein4e-73274
NC_011138:318168:329229329229329927699Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein1e-64246
NC_007520:2305610:232265223226522323452801Thiomicrospira crunogena XCL-2, complete genomeputative ORF1 (plasmid pTOM9)3e-30132
NC_018644:516157:5405655405655416831119Alpha proteobacterium HIMB59 chromosome, complete genomeHupE/UreJ protein7e-1787.4
NC_012914:1851102:1883270188327018844301161Paenibacillus sp. JDR-2, complete genomehypothetical protein1e-1686.7
NC_015572:319725:3257543257543268511098Methylomonas methanica MC09 chromosome, complete genomehypothetical protein3e-1582
NC_012914:5372712:5379256537925653804461191Paenibacillus sp. JDR-2, complete genomehypothetical protein2e-1066.2
NC_005125:3158667:3181025318102531821671143Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-0961.6