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Query: NC_008278:7409711:7413996 Frankia alni ACN14a, complete genome

Start: 7413996, End: 7415792, Length: 1797

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015656:3300747:3322083332208333234741392Frankia symbiont of Datisca glomerata chromosome, complete genomenitrogenase molybdenum-iron cofactor biosynthesis protein NifN3e-51203
NC_010546:553774:5721925721925735561365Cyanothece sp. ATCC 51142 chromosome circular, complete sequencenitrogenase molybdenum-iron cofactor biosynthesis protein1e-33144
NC_010529:296500:3198043198043211111308Cupriavidus taiwanensis plasmid pRALTA, complete sequencenifN nitrogenase iron-molybdenum cofactor biosynthesis protein2e-33144
NC_017161:1012874:1042881104288110442241344Hydrogenobacter thermophilus TK-6 chromosome, complete genomenitrogenase molybdenum-iron cofactor biosynthesis protein NifN1e-32141
NC_013799:1012884:1042890104289010442331344Hydrogenobacter thermophilus TK-6, complete genomenitrogenase iron-molybdenum cofactor biosynthesis protein1e-32141
NC_004463:1898648:1912695191269519141041410Bradyrhizobium japonicum USDA 110, complete genomenitrogenase molybdenum-cofactor synthesis protein2e-32140
NC_013894:415776:4223454223454236881344Thermocrinis albus DSM 14484 chromosome, complete genomenitrogenase molybdenum-iron cofactor biosynthesis protein NifN2e-30134
NC_011894:4066926:4065547406554740669291383Methylobacterium nodulans ORS 2060, complete genomenitrogenase molybdenum-iron cofactor biosynthesis protein NifN4e-30133
NC_013771:684966:7006787006787019881311Cyanobacterium UCYN-A, complete genomenitrogenase molybdenum-iron cofactor biosynthesis protein NifN7e-29129
NC_010511:3947948:3949470394947039508521383Methylobacterium sp. 4-46 chromosome, complete genomenitrogenase molybdenum-cofactor biosynthesis protein NifN1e-28128
NC_014840:286767:3129653129653143381374Pantoea sp. At-9b plasmid pPAT9B03, complete sequencenitrogenase molybdenum-iron cofactor biosynthesis protein NifN2e-28127
NC_016641:2815974:2826904282690428282111308Paenibacillus terrae HPL-003 chromosome, complete genomenitrogenase molybdenum-cofactor biosynthesis protein NifN1e-27124
NC_009634:53555:5714457144585201377Methanococcus vannielii SB chromosome, complete genomenitrogenase3e-23110
NC_000916:1417981:1432624143262414339701347Methanothermobacter thermautotrophicus str. Delta H, completenitrogenase molybdenum-iron protein, NifN subunit4e-23110
NC_014216:2860342:2882365288236528838131449Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeNitrogenase7e-22105
NC_009975:1682000:1691238169123816926261389Methanococcus maripaludis C6, complete genomeNitrogenase5e-21103
NC_012881:478042:4793494793494807071359Desulfovibrio salexigens DSM 2638, complete genomeNitrogenase5e-21103
NC_009135:620312:6388136388136401891377Methanococcus maripaludis C5, complete genomeNitrogenase4e-21103
NC_009135:620312:6359496359496373371389Methanococcus maripaludis C5, complete genomeNitrogenase3e-21103
NC_009975:1682000:1688378168837816897541377Methanococcus maripaludis C6, complete genomeNitrogenase8e-21102
NC_005791:837505:8499998499998513751377Methanococcus maripaludis S2, complete genomeiron-molybdenum cofactor biosynthesis protein, subunit N9e-21102
NC_015847:909938:9224039224039237791377Methanococcus maripaludis XI chromosome, complete genomenitrogenase1e-20102
NC_000916:1417981:1429847142984714312261380Methanothermobacter thermautotrophicus str. Delta H, completenitrogenase molybdenum-iron protein, NifK subunit3e-20100
NC_003901:860242:8724728724728740521581Methanosarcina mazei Go1, complete genomenitrogenase iron-molybdenum cofactor biosynthesis protein NifN3e-20100
NC_003552:4782635:4795539479553947971161578Methanosarcina acetivorans C2A, complete genomenitrogenase associated protein N5e-2099.8
NC_009634:53555:5998659986613741389Methanococcus vannielii SB chromosome, complete genomenitrogenase3e-1997.4
NC_005791:837505:8471288471288485161389Methanococcus maripaludis S2, complete genomeOxidoreductase, nitrogenase component 14e-1997.1
NC_015636:1123053:1129908112990811312361329Methanothermococcus okinawensis IH1 chromosome, complete genomeNitrogenase3e-1997.1
NC_015847:909938:9195329195329209201389Methanococcus maripaludis XI chromosome, complete genomenitrogenase4e-1996.7
NC_021182:3438601:3444177344417734469662790Clostridium pasteurianum BC1, complete genomenitrogenase cofactor biosynthesis protein NifB6e-1996.3
NC_011027:1763952:1776438177643817778051368Chlorobaculum parvum NCIB 8327, complete genomeNitrogenase8e-1995.9
NC_014632:1514500:1518624151862415200211398Ilyobacter polytropus DSM 2926 chromosome, complete genomenitrogenase1e-1895.5
NC_011837:3052000:3060143306014330628152673Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1895.1
NC_011296:1636242:1645276164527616467871512Thermodesulfovibrio yellowstonii DSM 11347, complete genomenitrogenase molybdenum-iron protein beta chain4e-1893.2
NC_015687:279641:2900612900612927092649Clostridium acetobutylicum DSM 1731 chromosome, complete genomebifunctional nitrogenase iron molybdenum cofactor biosinthesis protein/nitrogenase molybdenum-iron protein subunit beta, nifB-nitrogenase iron-molybde8e-1892.4
NC_003030:279643:2900632900632927112649Clostridium acetobutylicum ATCC 824, complete genomeFusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogen8e-1892.4
NC_017295:279633:2900532900532927012649Clostridium acetobutylicum EA 2018 chromosome, complete genomeFusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molybdenum-iron protein beta chain, nifB-nitrogen8e-1892.4
NC_009767:5230790:5240325524032552417521428Roseiflexus castenholzii DSM 13941, complete genomeNitrogenase1e-1792
NC_011565:777929:7862307862307876121383Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,nitrogenase molybdenum-iron protein beta subunit 11e-1792
NC_008278:7409711:7417374741737474189361563Frankia alni ACN14a, complete genomeNitrogenase molybdenum-iron protein beta chain (Nitrogenase component I) (Dinitrogenase)3e-1790.5
NC_014328:522045:5333055333055359922688Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase associated protein N5e-1789.7
NC_015416:525018:5457905457905470941305Methanosaeta concilii GP-6 chromosome, complete genomenitrogenase molybdenum-iron protein beta chain6e-1789.7
NC_011565:777929:7889637889637904261464Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,nitrogenase molybdenum-iron protein beta subunit 28e-1789.4
NC_011837:3052000:3064251306425130656151365Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1688.6
NC_014632:1514500:1521551152155115229301380Ilyobacter polytropus DSM 2926 chromosome, complete genomeMo-nitrogenase MoFe protein subunit NifK2e-1688.2
NC_021182:3438601:3448676344867634500521377Clostridium pasteurianum BC1, complete genomenitrogenase molybdenum-iron protein beta chain1e-1688.2
NC_004463:1898648:1909393190939319109491557Bradyrhizobium japonicum USDA 110, complete genomenitrogenase molybdenum-iron protein beta chain3e-1687
NC_016627:1452688:1463013146301314657152703Clostridium clariflavum DSM 19732 chromosome, complete genomenitrogenase cofactor biosynthesis protein NifB4e-1687
NC_015416:525018:5429995429995443571359Methanosaeta concilii GP-6 chromosome, complete genomenitrogenase molybdenum-iron protein beta chain8e-1685.9
NC_016641:2815974:2823946282394628254751530Paenibacillus terrae HPL-003 chromosome, complete genomenitrogenase molybdenum-iron protein subunit beta8e-1685.9
NC_014166:33138:4453344533460741542Arcobacter nitrofigilis DSM 7299 chromosome, complete genomenitrogenase molybdenum-iron protein beta chain8e-1685.9
NC_013771:684966:6972606972606987891530Cyanobacterium UCYN-A, complete genomeMo-nitrogenase MoFe protein subunit NifK1e-1585.5
NC_014328:522045:5299765299765313371362Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase molybdenum-iron protein subunit beta1e-1585.5
NC_014216:2860342:2863637286363728650101374Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenitrogenase molybdenum-iron protein beta chain2e-1584.7
NC_011296:1636242:1642711164271116452662556Thermodesulfovibrio yellowstonii DSM 11347, complete genomeNifEN22e-1584.7
NC_010546:553774:5685535685535700881536Cyanothece sp. ATCC 51142 chromosome circular, complete sequencenitrogenase molybdenum-iron protein beta chain2e-1584.7
NC_009437:2579161:2609670260967026110491380Caldicellulosiruptor saccharolyticus DSM 8903, complete genomenitrogenase2e-1584.3
NC_015636:1123053:1133267113326711346791413Methanothermococcus okinawensis IH1 chromosome, complete genomeoxidoreductase/nitrogenase component 13e-1584
NC_016627:1452688:1459960145996014613211362Clostridium clariflavum DSM 19732 chromosome, complete genomeMo-nitrogenase MoFe protein subunit NifK5e-1583.2
NC_017295:279633:2871762871762885401365Clostridium acetobutylicum EA 2018 chromosome, complete genomeNitrogenase molybdenum-iron protein, beta chain, gene nifK6e-1583.2
NC_003030:279643:2871862871862885501365Clostridium acetobutylicum ATCC 824, complete genomeNitrogenase molibdenum-iron protein, beta chain, gene nifK6e-1583.2
NC_015687:279641:2871842871842885481365Clostridium acetobutylicum DSM 1731 chromosome, complete genomenitrogenase molybdenum-iron protein subunit beta, nifK6e-1583.2
NC_012881:478042:4841844841844855571374Desulfovibrio salexigens DSM 2638, complete genomenitrogenase molybdenum-iron protein beta chain7e-1582.8
NC_017192:20404:2702127021285651545Arcobacter sp. L, complete genomenitrogenase molybdenum-iron protein beta subunit9e-1582.4
NC_010529:296500:3355613355613371201560Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNifK nitrogenase molybdenum-iron protein beta chain (Nitrogenase component I) (Dinitrogenase)1e-1482
NC_011027:1763952:1773523177352317749021380Chlorobaculum parvum NCIB 8327, complete genomenitrogenase molybdenum-iron protein beta chain7e-1479.3
NC_003552:4782635:4792469479246947938391371Methanosarcina acetivorans C2A, complete genomenitrogenase, subunit beta9e-1479
NC_020389:714178:7218147218147231841371Methanosarcina mazei Tuc01, complete genomeNitrogenase (molybdenum-iron) beta chain2e-1377.8
NC_003901:860242:8693168693168706861371Methanosarcina mazei Go1, complete genomenitrogenase molybdenum-iron protein beta chain2e-1377.8
NC_011894:4066926:4068522406852240700601539Methylobacterium nodulans ORS 2060, complete genomenitrogenase molybdenum-iron protein beta chain6e-1376.3
NC_012560:4929683:4956821495682149582091389Azotobacter vinelandii DJ, complete genomeFe-only nitrogenase, beta subunit6e-1376.3
NC_021150:4929670:4956808495680849581961389Azotobacter vinelandii CA6, complete genomeFe-only nitrogenase, beta subunit6e-1376.3
NC_013887:17160:2959329593309871395Methanocaldococcus sp. FS406-22 chromosome, complete genomeNitrogenase3e-1273.9