Pre_GI: BLASTP Hits

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Query: NC_008271:119957:123377 Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence

Start: 123377, End: 123688, Length: 312

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008703:31500:4215742157437971641Mycobacterium sp. KMS plasmid pMKMS01, complete sequenceParB domain protein nuclease7e-0959.3
NC_014811:166389:1766701766701783101641Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequencetranscriptional regulator7e-0959.3
NC_008699:1673181:1679672167967216811231452Nocardioides sp. JS614, complete genomeParB domain protein nuclease1e-0652