Pre_GI: BLASTP Hits

Some Help

Query: NC_007953:811500:827681 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 827681, End: 829105, Length: 1425

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008312:5637974:5653497565349756548521356Trichodesmium erythraeum IMS101, complete genomeFAD linked oxidase-like2e-81303
NC_017276:2481083:2500916250091625039183003Sulfolobus islandicus REY15A chromosome, complete genomeFAD linked oxidase domain-containing protein3e-0757.4
NC_002754:1968668:1986907198690719899093003Sulfolobus solfataricus P2, complete genomeDehydrogenase, putative3e-0757
NC_017275:2615814:2633123263312326361253003Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD linked oxidase domain-containing protein4e-0756.6
NC_012632:2654200:2670471267047126734733003Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD linked oxidase domain-containing protein4e-0756.6
NC_012623:2774910:2790237279023727932393003Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD linked oxidase domain-containing protein4e-0756.6
NC_012726:2549813:2564717256471725677193003Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD linked oxidase domain-containing protein4e-0756.6
NC_013769:2685000:2700105270010527031073003Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0654.3
NC_012589:2698556:2714345271434527173473003Sulfolobus islandicus L.S.2.15, complete genomeFAD linked oxidase domain protein2e-0654.3