Pre_GI: BLASTP Hits

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Query: NC_006347:3166000:3188586 Bacteroides fragilis YCH46, complete genome

Start: 3188586, End: 3189104, Length: 519

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003228:3212500:324997932499793250497519Bacteroides fragilis NCTC 9343, complete genomeputative transcriptional regulator (pseudogene)2e-96350
NC_009614:3385187:338899133889913389491501Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator UpxY-like protein6e-74276
NC_015160:3585354:360347936034793604009531Odoribacter splanchnicus DSM 20712 chromosome, complete genomeNGN domain-containing protein2e-39161
NC_019904:5241444:527977352797735280276504Echinicola vietnamensis DSM 17526 chromosome, complete genometranscription antiterminator3e-1890.9
NC_014759:2598515:261424026142402614764525Marivirga tractuosa DSM 4126 chromosome, complete genomenusg antitermination factor1e-1479.3
NC_014355:2635500:265714026571402657703564Candidatus Nitrospira defluvii, complete genomeputative transcription termination/antitermination factor NusG1e-1272.8
NC_016609:8271000:827128182712818271790510Niastella koreensis GR20-10 chromosome, complete genomeNusG antitermination factor1e-1272.4
NC_014041:558000:563449563449563943495Zunongwangia profunda SM-A87 chromosome, complete genomeNusG antitermination factor6e-1270.1
NC_008639:2968000:297221029722102972752543Chlorobium phaeobacteroides DSM 266, complete genomeNusG antitermination factor3e-1168.2
NC_013730:3208571:322110832211083221593486Spirosoma linguale DSM 74, complete genomeNusG antitermination factor9e-1063.2
NC_008700:2701500:273069327306932731196504Shewanella amazonensis SB2B, complete genometranscriptional activator rfaH, putative2e-0858.5
NC_014032:825793:926006926006926695690Salinibacter ruber M8 chromosome, complete genometranscription antitermination protein nusG2e-0858.5
NC_007677:771168:829009829009829698690Salinibacter ruber DSM 13855, complete genomeputative transcriptional regulator2e-0858.5
NC_009614:978506:982876982876983343468Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator2e-0755.1
NC_009614:1999130:201626020162602016727468Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator2e-0755.1
NC_007954:3171081:320585032058503206350501Shewanella denitrificans OS217, complete genometranscriptional activator RfaH6e-0753.5
NC_011663:1709003:171310317131031713609507Shewanella baltica OS223 chromosome, complete genometranscriptional acivator RfaH8e-0753.1
NC_009665:3460906:348608834860883486594507Shewanella baltica OS185 chromosome, complete genometranscriptional acivator RfaH8e-0753.1
NC_008322:1595500:159756415975641598064501Shewanella sp. MR-7, complete genomeNusG antitermination factor1e-0652.8