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Query: NC_005363:2588852:2597232 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2597232, End: 2598335, Length: 1104

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015576:808926:817836817836818648813Mycobacterium sp. JDM601 chromosome, complete genomeprophage integrase8e-0858.5
NC_012796:2757500:2757717275771727589461230Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0757.8
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-0757
NC_008789:350650:3635873635873647261140Halorhodospira halophila SL1, complete genomephage integrase family protein5e-0755.8
NC_011899:355638:3706253706253718001176Halothermothrix orenii H 168, complete genomephage integrase family protein7e-0755.1
NC_016048:2873669:2905525290552529065321008Oscillibacter valericigenes Sjm18-20, complete genomeputative recombinase2e-0653.5
NC_012526:300126:3162543162543173931140Deinococcus deserti VCD115, complete genomeputative Tyrosine recombinase xerC-like protein4e-0652.8
NC_009142:267550:2744052744052757241320Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase (recombinase)8e-0651.6