Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1863892 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1863892, End: 1864506, Length: 615

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014965:1428902:150046815004681501082615Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein7e-115412
NC_017986:4124335:413945941394594140127669Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-0961.6
NC_013192:305478:323275323275323898624Leptotrichia buccalis DSM 1135, complete genomehypothetical protein3e-0651.6
NC_006138:1571878:158146115814611582099639Desulfotalea psychrophila LSv54, complete genomehypothetical protein7e-0650.4