Pre_GI: BLASTP Hits

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Query: NC_004603:1115134:1139058 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1139058, End: 1139798, Length: 741

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012982:711122:721907721907722662756Hirschia baltica ATCC 49814, complete genomehypothetical protein1e-72273
NC_014834:2264108:226338722633872264133747Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein2e-63242
NC_017047:2042346:204640220464022047157756Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-59229
NC_014837:1144500:115462611546261155381756Pantoea sp. At-9b chromosome, complete genomehypothetical protein3e-59228
NC_012483:1813521:183912118391211839870750Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein2e-34145
NC_008781:2575213:259023225902322591161930Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein2e-33142
NC_008358:2638245:270269327026932703586894Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein3e-23108
NC_013421:1505176:151567015156701516536867Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-22105
NC_012731:3411161:3468506346850634696331128Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-1582.4
NC_009441:3597020:362239436223943623113720Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein1e-1376.6
NC_016943:1735057:174292817429281743209282Blastococcus saxobsidens DD2, complete genomehypothetical protein1e-0963.9
NC_011666:2109274:212747921274792127820342Methylocella silvestris BL2, complete genomehypothetical protein7e-0754.3
NC_015312:4658548:466692446669244667220297Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein2e-0652.8