Pre_GI: BLASTP Hits

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Query: NC_004129:5373886:5435245 Pseudomonas fluorescens Pf-5, complete genome

Start: 5435245, End: 5438169, Length: 2925

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4641301464130146442522952Pseudomonas aeruginosa PA7 chromosome, complete genometype IV secretory pathway, VirB4 component01449
NC_018080:5091772:5166408516640851692542847Pseudomonas aeruginosa DK2 chromosome, complete genometype IV secretory pathway, VirB4 component01448
NC_008463:5313527:5337054533705453399962943Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein01444
NC_012560:3667177:3691703369170336946242922Azotobacter vinelandii DJ, complete genomelipoprotein01395
NC_021150:3667176:3691702369170236946232922Azotobacter vinelandii CA6, complete genomelipoprotein01395
NC_010170:1417615:1417615141761514204942880Bordetella petrii, complete genomehypothetical protein01221
NC_012691:2614603:2667249266724926701252877Tolumonas auensis DSM 9187, complete genomehypothetical protein01212
NC_008344:49039:8453984539874302892Nitrosomonas eutropha C91, complete genomehypothetical protein01207
NC_015726:2862500:2878469287846928813542886Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein01197
NC_015379:2417312:2439770243977024426072838Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein01197
NC_011662:1017933:1038422103842210413102889Thauera sp. MZ1T, complete genomehypothetical protein01194
NC_011901:2983555:2998441299844130013232883Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeAAA ATPase01193
NC_015422:1876102:1900837190083719037252889Alicycliphilus denitrificans K601 chromosome, complete genomeconjugative transfer ATPase01193
NC_012912:483390:5015455015455043942850Dickeya zeae Ech1591, complete genomehypothetical protein01193
NC_006513:1379735:1435588143558814384762889Azoarcus sp. EbN1, complete genomehypothetical protein01178
NC_009138:1974935:2027132202713220297622631Herminiimonas arsenicoxydans, complete genomehypothetical protein01152
NC_012660:2045398:2102000210200021047502751Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein01034
NC_016830:3869572:3909702390970239123592658Pseudomonas fluorescens F113 chromosome, complete genomeprotein VirB401024
NC_011000:2732330:2786812278681227887671956Burkholderia cenocepacia J2315 chromosome 1, complete sequence0916
NC_013892:1483000:1485554148555414883192766Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein0896
NC_014228:3534378:3543645354364535464222778Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein0889
NC_013892:3278647:3309717330971733124822766Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein0868
NC_009708:4182460:4182460418246041853062847Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein0866
NC_012731:600518:6005186005186031482631Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein0856
NC_009832:4521585:4543239454323945461032865Serratia proteamaculans 568, complete genomeputative plasmid-related protein0852
NC_013421:701005:7010057010057038302826Pectobacterium wasabiae WPP163, complete genomehypothetical protein0847
NC_014029:331919:3709483709483738062859Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0843
NC_010554:2789722:2814285281428528171522868Proteus mirabilis HI4320, complete genomehypothetical protein0841
NC_016809:112410:1142431142431171132871Haemophilus influenzae 10810, complete genomehypothetical protein0839
NC_010170:1498253:1544570154457015463811812Bordetella petrii, complete genomepseudogene0836
NC_012779:346998:3469983469983498622865Edwardsiella ictaluri 93-146, complete genomehypothetical protein0836
NC_015572:2186394:2222819222281922256292811Methylomonas methanica MC09 chromosome, complete genomeconjugative transfer ATPase, PFL_4706 family0760
NC_011992:1213726:1226605122660512285841980Acidovorax ebreus TPSY, complete genomehypothetical protein0726
NC_008752:3007073:3027900302790030307942895Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein8e-172605
NC_014228:3391500:3399836339983634021752340Xenorhabdus nematophila ATCC 19061, complete genome2e-142507
NC_010170:1498253:1542229154222915433171089Bordetella petrii, complete genomehypothetical protein1e-98362
NC_013892:3278647:332101133210113321826816Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-84312
NC_009792:3225965:324339432433943244317924Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-81305
NC_011901:625712:648006648006648728723Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-71271
NC_014228:3391500:339941733994173399776360Xenorhabdus nematophila ATCC 19061, complete genome4e-1377.8