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Query: NC_004129:4368356:4370137 Pseudomonas fluorescens Pf-5, complete genome

Start: 4370137, End: 4370745, Length: 609

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:1770106:177219517721951772833639Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-75281
NC_016845:1285435:130695813069581307593636Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-73275
NC_016514:2387312:239003623900362390848813Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein8e-73273
NC_021066:2226826:223037422303742231003630Raoultella ornithinolytica B6, complete genomehypothetical protein2e-72271
NC_014562:983398:100606110060611006690630Pantoea vagans C9-1 chromosome, complete genomehypothetical protein4e-70263
NC_010002:3509506:354414135441413544773633Delftia acidovorans SPH-1, complete genomehypothetical protein6e-67253
NC_010404:55908:773177731777958642Acinetobacter baumannii plasmid p3ABAYE, complete sequencehypothetical protein5e-48190
NC_014839:170000:180915180915181470556Pantoea sp. At-9b plasmid pPAT9B02, complete sequence2e-29129
NC_017323:599549:645672645672646148477Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencehypothetical protein1e-1170.1