Pre_GI: BLASTP Hits

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Query: NC_004129:3452885:3467002 Pseudomonas fluorescens Pf-5, complete genome

Start: 3467002, End: 3467466, Length: 465

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3220500:323786232378623238329468Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-34145
NC_007510:1959883:201158520115852012091507Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein9e-23105
NC_012724:1914740:192993919299391930160222Burkholderia glumae BGR1 chromosome 1, complete genome7e-0649.7