Pre_GI: BLASTP Hits

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Query: NC_004129:1848701:1857063 Pseudomonas fluorescens Pf-5, complete genome

Start: 1857063, End: 1857284, Length: 222

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017271:2278500:229411822941182294342225Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein1e-26118
NC_007508:2277640:229397522939752294199225Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative acyl carrier protein1e-25115
NC_012732:1:120661206612290225Rickettsia peacockii str. Rustic plasmid pRPR, complete sequencehypothetical protein8e-25112
NC_010002:661696:678164678164678388225Delftia acidovorans SPH-1, complete genomeacyl carrier protein-related protein4e-23106
NC_014117:3375796:338823333882333388475243Burkholderia sp. CCGE1002 chromosome chromosome 1, completeacyl carrier protein-related protein3e-22103
NC_015160:3556114:356651435665143566741228Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative acyl carrier protein2e-1167.8
NC_019968:891904:904278904278904508231Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein2e-0858.2
NC_009615:644757:664753664753664983231Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacyl carrier protein1e-0755.5
NC_009615:4425500:444129444412944441530237Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacyl carrier protein4e-0753.5