Pre_GI: BLASTP Hits

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Query: NC_004129:1741816:1762422 Pseudomonas fluorescens Pf-5, complete genome

Start: 1762422, End: 1763291, Length: 870

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:1719407:173642217364221737288867Pseudomonas fluorescens F113 chromosome, complete genomeputative lipoprotein5e-117420
NC_014541:1753776:178068617806861781525840Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein3e-23109
NC_009659:3815966:381648838164883817381894Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-1583.6
NC_008825:564392:588079588079588936858Methylibium petroleiphilum PM1, complete genomeputative lipoprotein2e-0963.5