Pre_GI: BLASTP Hits

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Query: NC_003911:2042389:2046619 Silicibacter pomeroyi DSS-3, complete genome

Start: 2046619, End: 2046708, Length: 90

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007802:1991211:19970621997062199715190Jannaschia sp. CCS1, complete genometRNA-Ser1e-0755.5
NC_009428:1827352:18507531850753185084290Rhodobacter sphaeroides ATCC 17025 chromosome, complete genometRNA-Ser4e-0753.5
NC_007493:1929000:19424391942439194252890Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencetRNA-Ser4e-0753.5