Pre_GI: BLASTP Hits

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Query: NC_003888:7561923:7572343 Streptomyces coelicolor A3(2), complete genome

Start: 7572343, End: 7572801, Length: 459

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014165:374674:394345394345394782438Thermobispora bispora DSM 43833 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase8e-52202
NC_007333:1743890:179418717941871794618432Thermobifida fusca YX, complete genomehypothetical protein3e-45180
NC_016907:152500:155313155313155807495Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceglyoxalase4e-40163
NC_014666:8016066:803299680329968033532537Frankia sp. EuI1c chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase3e-37153
NC_015690:3477573:352320635232063523751546Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-28124
NC_010162:7899980:790765279076527908125474Sorangium cellulosum 'So ce 56', complete genomelactoylglutathione lyase1e-27122
NC_013205:576583:596035596035596505471Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Glyoxalase/bleomycin resistance protein/dioxygenase4e-27120
NC_014976:627935:634909634909635349441Bacillus subtilis BSn5 chromosome, complete genomeputative thiol lyase8e-25112
NC_015690:3477573:352102935210293521499471Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-24111
NC_020244:4020315:403093140309314031371441Bacillus subtilis XF-1, complete genomehypothetical protein2e-24110
NC_011658:2978000:299702829970282997465438Bacillus cereus AH187 chromosome, complete genomeglyoxalase2e-23108
NC_016771:2933886:295290529529052953342438Bacillus cereus NC7401, complete genomeglyoxalase family protein2e-23108
NC_006582:883922:903799903799904170372Bacillus clausii KSM-K16, complete genomelactoylglutathione lyase9e-23105
NC_010682:3745000:374636637463663746854489Ralstonia pickettii 12J chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase1e-1788.6
NC_010087:376918:415501415501415980480Burkholderia multivorans ATCC 17616 chromosome 3, completeGlyoxalase/bleomycin resistance protein/dioxygenase2e-1788.2
NC_010801:505000:508878508878509357480Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein2e-1788.2
NC_010682:1913941:191444619144461914928483Ralstonia pickettii 12J chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase4e-1786.7
NC_015572:4576778:457858245785824579016435Methylomonas methanica MC09 chromosome, complete genomehypothetical protein1e-1685.5
NC_007347:1215358:123033512303351230835501Ralstonia eutropha JMP134 chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase3e-1684.3
NC_014640:5047201:505241850524185052900483Achromobacter xylosoxidans A8 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 202e-1581.3
NC_010524:3445641:345026134502613450782522Leptothrix cholodnii SP-6, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase6e-1579.7
NC_013440:3870697:388703438870343887897864Haliangium ochraceum DSM 14365, complete genomeProtein-tyrosine phosphatase, low molecular weight3e-0650.8