Pre_GI: BLASTP Hits

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Query: NC_003277:22257:30148 Salmonella typhimurium LT2 plasmid pSLT, complete sequence

Start: 30148, End: 30915, Length: 768

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016861:22256:301413014130908768Salmonella enterica subsp. enterica serovar Typhimurium str28.1 kDa virulence protein4e-143507
NC_010067:660659:6697546697546746734920Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-24113
NC_016818:2927500:2944341294434129472232883Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completevirulence plasmid 28 protein1e-1583.2
NC_014718:232832:2759062759062790853180Burkholderia rhizoxinica HKI 454 chromosome, complete genomeInsecticidal toxin complex protein TccA3e-1479
NC_005126:4857500:4874151487415148770512901Photorhabdus luminescens subsp. laumondii TTO1, complete genomeInsecticidal toxin complex protein TccA14e-1478.6
NC_017047:2079368:2116416211641621206454230Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-0858.5