Pre_GI: BLASTP Hits

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Query: NC_001263:2236777:2248448 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2248448, End: 2249602, Length: 1155

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:2490000:2495667249566724968811215Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF4181e-1274.3
NC_020388:1100759:1143857114385711450771221Natronomonas moolapensis 8.8.11 complete genomehypothetical protein1e-1274.3
NC_009725:2517428:2527411252741125286281218Bacillus amyloliquefaciens FZB42, complete genomeYrkO3e-0963.5
NC_016792:143614:1640161640161651611146Bacillus cereus NC7401 plasmid pNCcld, complete sequencehypothetical protein2e-0860.1
NC_011655:88336:1087381087381098831146Bacillus cereus AH187 plasmid pAH187_270, complete sequencehypothetical protein2e-0860.1
NC_005707:12735:1462314623157681146Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequencehypothetical protein2e-0757.4
NC_000964:2702376:2704624270462427058411218Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-0756.2
NC_019896:1483073:1519937151993715211541218Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-0756.2
NC_020244:2509000:2509199250919925104161218Bacillus subtilis XF-1, complete genomeputative integral inner membrane protein2e-0654.3
NC_014655:2581968:2580846258084625819791134Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein3e-0653.5
NC_009848:161373:1690661690661701931128Bacillus pumilus SAFR-032, complete genomehypothetical protein4e-0652.8