Pre_GI: BLASTP Hits

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Query: NC_000958:73685:78759 Deinococcus radiodurans R1 plasmid MP1, complete sequence

Start: 78759, End: 81962, Length: 3204

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010175:3712456:3716275371627537196313357Chloroflexus aurantiacus J-10-fl, complete genomeEndonuclease/exonuclease/phosphatase3e-92340
NC_014221:591785:5964385964385990352598Truepera radiovictrix DSM 17093 chromosome, complete genomeEndonuclease/exonuclease/phosphatase4e-90333
NC_007645:6647500:6673177667317766756842508Hahella chejuensis KCTC 2396, complete genomepredicted extracellular nuclease2e-85318
NC_009052:2107692:2110871211087121137052835Shewanella baltica OS155, complete genomePKD domain containing protein9e-82305
NC_010628:1734000:1739570173957017460406471Nostoc punctiforme PCC 73102, complete genomeputative outer membrane adhesin like proteiin5e-78293
NC_010002:5143869:5162323516232351661773855Delftia acidovorans SPH-1, complete genomeEndonuclease/exonuclease/phosphatase6e-76286
NC_007511:3103999:3128570312857031303841815Burkholderia sp. 383 chromosome 2, complete sequenceEndonuclease/exonuclease/phosphatase2e-71271
NC_000958:73685:8267582675853352661Deinococcus radiodurans R1 plasmid MP1, complete sequencehypothetical protein4e-29130
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-25118
NC_004193:375416:5309605309605346793720Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-23111
NC_016593:3249767:3257848325784832614503603Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeendonuclease/exonuclease/phosphatase5e-1997.4
NC_011729:432461:4324614324614356823222Cyanothece sp. PCC 7424 chromosome, complete genomeendonuclease/exonuclease/phosphatase3e-1378.2
NC_015321:867143:8880818880818924904410Fluviicola taffensis DSM 16823 chromosome, complete genomehypothetical protein1e-1275.9
NC_000958:73685:7368573685771223438Deinococcus radiodurans R1 plasmid MP1, complete sequencehypothetical protein2e-1068.9
NC_012924:1860631:1870935187093518740543120Streptococcus suis SC84, complete genomesurface-anchored DNA nuclease9e-1066.6
NC_012925:1776450:1782526178252617856453120Streptococcus suis P1/7, complete genomesurface-anchored DNA nuclease9e-1066.6
NC_009443:1860390:1870634187063418738133180Streptococcus suis 98HAH33, complete genomeDNA nuclease9e-1066.6
NC_009442:1865244:1871260187126018744393180Streptococcus suis 05ZYH33 chromosome, complete genomeDNA nuclease9e-1066.6
NC_012926:1910882:1921186192118619243053120Streptococcus suis BM407 chromosome, complete genomesurface-anchored DNA nuclease1e-0966.6