Pre_GI: BLASTP Hits

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Query: NC_000907:1568867:1570166 Haemophilus influenzae Rd KW20, complete genome

Start: 1570166, End: 1570441, Length: 276

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: Small, nonmotile, Gram-negative bacterium whose only natural host is human. It lacks an important fimbrial gene cluster that is important for virulence as compared to type b strains and was the first microbe to ever be sequenced. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002940:78392:820238202382544522Haemophilus ducreyi 35000HP, complete genomepossible N-acetylmuramoyl-L-alanine amidase2e-38157
NC_020125:194691:201926201926202375450Riemerella anatipestifer RA-CH-2, complete genomeNegative regulator of beta-lactamase expression1e-1685.1
NC_009614:3385187:339374133937413394190450Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1682.8
NC_006347:3166000:318371231837123184185474Bacteroides fragilis YCH46, complete genomeN-acetylmuramoyl-L-alanine amidase8e-1682.4
NC_016776:3258939:328244832824483282897450Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase8e-1682.4
NC_003228:3212500:324505032450503245499450Bacteroides fragilis NCTC 9343, complete genomeputative N-acetylmuramoyl-L-alanine amidase8e-1682.4
NC_004663:2509433:254439625443962544833438Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1581.3
NC_016776:2956444:299380429938042994247444Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-1580.9
NC_014933:510164:560362560362560802441Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 21e-1272
NC_015177:1131173:114429711442971145226930Pedobacter saltans DSM 12145 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 27e-0959.3
NC_002947:2589951:259108225910822591531450Pseudomonas putida KT2440, complete genomeN-acetylmuramoyl-L-alanine amidase, putative7e-0752.8
NC_004663:2014035:203165820316582032071414Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase8e-0752.4
NC_009511:4882047:491115849111584911598441Sphingomonas wittichii RW1 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0652
NC_009615:1849237:186592118659211866367447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0649.7
NC_009615:644757:650831650831651277447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-0649.3