Pre_GI: BLASTN Hits

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Query: NC_020134:586840 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 586840, End: 604660, Length: 17821

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:57414557414559944025296Clostridium thermocellum ATCC 27405, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014150:446359*44635946998023622Brachyspira murdochii DSM 12563 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014652:62843562843565489426460Caldicellulosiruptor hydrothermalis 108 chromosome, complete5e-0763.9BLASTN svgBLASTP svg
NC_018664:16633241663324168566922346Clostridium acidurici 9a chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg