Query: NC_018870:115982 Thermacetogenium phaeum DSM 12270 chromosome, complete genome
Start: 115982, End: 169198, Length: 53217
Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria
General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_018870:1953748 | 1953748 | 1977323 | 23576 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 2e-110 | 408 | BLASTN svg | BLASTP svg |
NC_018870:705900 | 705900 | 737495 | 31596 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 1e-102 | 383 | BLASTN svg | BLASTP svg |
NC_018870:427357* | 427357 | 447296 | 19940 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 1e-84 | 323 | BLASTN svg | BLASTP svg |
NC_018870:303217 | 303217 | 324526 | 21310 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 4e-78 | 301 | BLASTN svg | BLASTP svg |
NC_018870:2316499* | 2316499 | 2383660 | 67162 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 4e-44 | 188 | BLASTN svg | BLASTP svg |
NC_010424:697187 | 697187 | 777303 | 80117 | Candidatus Desulforudis audaxviator MP104C, complete genome | 4e-38 | 168 | BLASTN svg | BLASTP svg |
NC_018870:354164 | 354164 | 373323 | 19160 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 2e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_007517:2342607 | 2342607 | 2370849 | 28243 | Geobacter metallireducens GS-15, complete genome | 3e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_018870:81396* | 81396 | 104099 | 22704 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 2e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_011830:633195 | 633195 | 656294 | 23100 | Desulfitobacterium hafniense DCB-2, complete genome | 7e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010814:903199 | 903199 | 924599 | 21401 | Geobacter lovleyi SZ, complete genome | 3e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012791:5496175 | 5496175 | 5517381 | 21207 | Variovorax paradoxus S110 chromosome 1, complete genome | 1e-07 | 67.9 | BLASTN svg | BLASTP svg |
NC_015519:426948* | 426948 | 469179 | 42232 | Tepidanaerobacter sp. Re1 chromosome, complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_018870:2537350 | 2537350 | 2561261 | 23912 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018870:2232857 | 2232857 | 2253099 | 20243 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011420:69843 | 69843 | 99275 | 29433 | Rhodospirillum centenum SW, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |