Pre_GI: BLASTN Hits

Some Help

Query: NC_018581:2768743 Gordonia sp. KTR9 chromosome, complete genome

Start: 2768743, End: 2832626, Length: 63884

Host Lineage: Gordonia; Gordonia; Gordoniaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolated from soil at an explosives testing facility. Can transform hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX), a cyclic nitramine explosive. Many military ranges in the United States and Canada are contaminated with explosive and propellant residues. Of the nitroaromatic and nitramine explosives that exist on these sites, hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) has a low sorption capacity and can migrate through soil into surface water and groundwater.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:256427*25642728240725981Frankia alni ACN14a, complete genome3e-30143BLASTN svgBLASTP svg
NC_013510:2937530*2937530296330725778Thermomonospora curvata DSM 43183, complete genome1e-29141BLASTN svgBLASTP svg
NC_014830:33874793387479343444046962Intrasporangium calvum DSM 43043 chromosome, complete genome2e-28137BLASTN svgBLASTP svg
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome2e-28137BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome2e-28137BLASTN svgBLASTP svg
NC_013530:24923122492312252459632285Xylanimonas cellulosilytica DSM 15894, complete genome2e-21113BLASTN svgBLASTP svg
NC_013521:345308*34530838171936412Sanguibacter keddieii DSM 10542, complete genome2e-21113BLASTN svgBLASTP svg
NC_008786:1298817*1298817132410025284Verminephrobacter eiseniae EF01-2, complete genome1e-19107BLASTN svgBLASTP svg
NC_014210:32485263248526327306124536Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-1695.6BLASTN svgBLASTP svg
NC_013235:508585*50858553729628712Nakamurella multipartita DSM 44233, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_018750:62378756237875626148023606Streptomyces venezuelae ATCC 10712, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_008596:13020001302000135784455845Mycobacterium smegmatis str. MC2 155, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_013947:3080290*3080290311039130102Stackebrandtia nassauensis DSM 44728 chromosome, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_014844:18189391818939184739528457Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_015671:31533253153325317759924275Cellvibrio gilvus ATCC 13127 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_009050:212270*21227028083968570Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence5e-0765.9BLASTN svgBLASTP svg
NC_015125:1668780*1668780169404425265Microbacterium testaceum StLB037, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014217:3431878*3431878345778325906Starkeya novella DSM 506 chromosome, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_009076:35645003564500360973145232Burkholderia pseudomallei 1106a chromosome I, complete sequence8e-0661.9BLASTN svgBLASTP svg