Pre_GI: BLASTN Hits

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Query: NC_017268:949543 Treponema pallidum subsp. pallidum str. Chicago chromosome,

Start: 949543, End: 971721, Length: 22179

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organisms is divided into subspecies each of which causes a specific disease. pallidum causes the venereal disease syphilis. pertenue, carateum and endemicum cause the skin infections yaws, pinta and bejel, respectively. Cells are motile, slender, helically shaped flexible organisms, 0.1-0.18 microns in diameter and 6-20 microns long.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000919:948287*94828797029722011Treponema pallidum subsp. pallidum str. Nichols, complete genome023340BLASTN svgBLASTP svg
NC_010741:949732*94973297174222011Treponema pallidum subsp. pallidum SS14, complete genome023320BLASTN svgBLASTP svg
NC_015714:943178*94317896120118024Treponema paraluiscuniculi Cuniculi A chromosome, complete genome022870BLASTN svgBLASTP svg
NC_014501:58328795832879585675123873Cyanothece sp. PCC 7822 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019970:1343670*1343670136621022541Thermoanaerobacterium thermosaccharolyticum M0795, complete genome7e-0763.9BLASTN svgBLASTP svg