Pre_GI: BLASTN Hits

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Query: NC_017249:8358438 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8358438, End: 8378033, Length: 19596

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome036330BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome02553BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome02230BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01655BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01651BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome3e-55224BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome9e-46192BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome9e-46192BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome9e-46192BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome9e-46192BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome9e-46192BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome9e-46192BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome9e-46192BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence9e-46192BLASTN svgBLASTP svg
NC_012811:22754122754127111643576Methylobacterium extorquens AM1 megaplasmid, complete sequence9e-46192BLASTN svgBLASTP svg
NC_015186:1126830*1126830116450437675Acidiphilium multivorum AIU301, complete genome2e-37165BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome2e-37165BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence8e-31143BLASTN svgBLASTP svg
NC_014006:2932959*2932959295601723059Sphingobium japonicum UT26S chromosome 1, complete genome3e-18101BLASTN svgBLASTP svg
NC_013851:26108472610847263605825212Allochromatium vinosum DSM 180 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009720:2424975*2424975244520720233Xanthobacter autotrophicus Py2, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008687:25669225669228607929388Paracoccus denitrificans PD1222 chromosome 2, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007973:14117141411714144204530332Ralstonia metallidurans CH34 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011060:1947795*1947795197153223738Pelodictyon phaeoclathratiforme BU-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0765.9BLASTN svgBLASTP svg
NC_010067:11161481116148113933023183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-0661.9BLASTN svgBLASTP svg
NC_019940:36607543660754368438423631Thioflavicoccus mobilis 8321 chromosome, complete genome9e-0660BLASTN svgBLASTP svg