Query: NC_017249:8358438 Bradyrhizobium japonicum USDA 6, complete genome
Start: 8358438, End: 8378033, Length: 19596
Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004463:1872537 | 1872537 | 1894863 | 22327 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 36330 | BLASTN svg | BLASTP svg |
NC_004463:1898648 | 1898648 | 1964255 | 65608 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 2553 | BLASTN svg | BLASTP svg |
NC_004463:2059500 | 2059500 | 2077839 | 18340 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 2230 | BLASTN svg | BLASTP svg |
NC_004463:1992000* | 1992000 | 2043697 | 51698 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1655 | BLASTN svg | BLASTP svg |
NC_004463:1749000 | 1749000 | 1768599 | 19600 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1651 | BLASTN svg | BLASTP svg |
NC_002678:5060670 | 5060670 | 5112833 | 52164 | Mesorhizobium loti MAFF303099, complete genome | 3e-55 | 224 | BLASTN svg | BLASTP svg |
NC_011757:1121262 | 1121262 | 1140882 | 19621 | Methylobacterium chloromethanicum CM4, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_011757:39881* | 39881 | 74099 | 34219 | Methylobacterium chloromethanicum CM4, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012808:1122341* | 1122341 | 1159209 | 36869 | Methylobacterium extorquens AM1, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012808:3711806 | 3711806 | 3734099 | 22294 | Methylobacterium extorquens AM1, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012808:4137000* | 4137000 | 4168017 | 31018 | Methylobacterium extorquens AM1, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012808:4235567* | 4235567 | 4258126 | 22560 | Methylobacterium extorquens AM1, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012808:921985 | 921985 | 944629 | 22645 | Methylobacterium extorquens AM1, complete genome | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012811:1105395 | 1105395 | 1129599 | 24205 | Methylobacterium extorquens AM1 megaplasmid, complete sequence | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_012811:227541 | 227541 | 271116 | 43576 | Methylobacterium extorquens AM1 megaplasmid, complete sequence | 9e-46 | 192 | BLASTN svg | BLASTP svg |
NC_015186:1126830* | 1126830 | 1164504 | 37675 | Acidiphilium multivorum AIU301, complete genome | 2e-37 | 165 | BLASTN svg | BLASTP svg |
NC_015186:347346* | 347346 | 374485 | 27140 | Acidiphilium multivorum AIU301, complete genome | 2e-37 | 165 | BLASTN svg | BLASTP svg |
NC_013856:692000 | 692000 | 719900 | 27901 | Azospirillum sp. B510 plasmid pAB510b, complete sequence | 8e-31 | 143 | BLASTN svg | BLASTP svg |
NC_014006:2932959* | 2932959 | 2956017 | 23059 | Sphingobium japonicum UT26S chromosome 1, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_013851:2610847 | 2610847 | 2636058 | 25212 | Allochromatium vinosum DSM 180 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009720:2424975* | 2424975 | 2445207 | 20233 | Xanthobacter autotrophicus Py2, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_008687:256692 | 256692 | 286079 | 29388 | Paracoccus denitrificans PD1222 chromosome 2, complete sequence | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_010505:400950 | 400950 | 425376 | 24427 | Methylobacterium radiotolerans JCM 2831, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_007973:1411714 | 1411714 | 1442045 | 30332 | Ralstonia metallidurans CH34 chromosome 1, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014375:1146328* | 1146328 | 1177099 | 30772 | Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011060:1947795* | 1947795 | 1971532 | 23738 | Pelodictyon phaeoclathratiforme BU-1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007510:3340008 | 3340008 | 3375417 | 35410 | Burkholderia sp. 383 chromosome 1, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015379:4249238 | 4249238 | 4275626 | 26389 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010067:1116148 | 1116148 | 1139330 | 23183 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019940:3660754 | 3660754 | 3684384 | 23631 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |