Query: NC_017249:8165826 Bradyrhizobium japonicum USDA 6, complete genome
Start: 8165826, End: 8199599, Length: 33774
Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004463:2059500 | 2059500 | 2077839 | 18340 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 3911 | BLASTN svg | BLASTP svg |
NC_012586:922095 | 922095 | 949504 | 27410 | Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence | 2e-63 | 252 | BLASTN svg | BLASTP svg |
NC_002947:4994335 | 4994335 | 5049356 | 55022 | Pseudomonas putida KT2440, complete genome | 7e-20 | 107 | BLASTN svg | BLASTP svg |
NC_003047:3360000 | 3360000 | 3418599 | 58600 | Sinorhizobium meliloti 1021, complete genome | 7e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010994:859500 | 859500 | 879803 | 20304 | Rhizobium etli CIAT 652, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010994:57362* | 57362 | 80682 | 23321 | Rhizobium etli CIAT 652, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_004463:18497 | 18497 | 46265 | 27769 | Bradyrhizobium japonicum USDA 110, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_004463:1898648 | 1898648 | 1964255 | 65608 | Bradyrhizobium japonicum USDA 110, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009667:2860818* | 2860818 | 2889999 | 29182 | Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015259:734795 | 734795 | 766247 | 31453 | Polymorphum gilvum SL003B-26A1 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_011982:206784 | 206784 | 231681 | 24898 | Agrobacterium vitis S4 plasmid pTiS4, complete sequence | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |