Pre_GI: BLASTN Hits

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Query: NC_017249:8165826 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8165826, End: 8199599, Length: 33774

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome03911BLASTN svgBLASTP svg
NC_012586:92209592209594950427410Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence2e-63252BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome7e-20107BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_010994:85950085950087980320304Rhizobium etli CIAT 652, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010994:57362*573628068223321Rhizobium etli CIAT 652, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009667:2860818*2860818288999929182Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011982:20678420678423168124898Agrobacterium vitis S4 plasmid pTiS4, complete sequence1e-0663.9BLASTN svgBLASTP svg