Pre_GI: BLASTN Hits

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Query: NC_017249:2109843 Bradyrhizobium japonicum USDA 6, complete genome

Start: 2109843, End: 2146612, Length: 36770

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome03081BLASTN svgBLASTP svg
NC_009720:75061275061278422333612Xanthobacter autotrophicus Py2, complete genome5e-52214BLASTN svgBLASTP svg
NC_010725:33150073315007334271327707Methylobacterium populi BJ001, complete genome2e-51212BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome1e-40176BLASTN svgBLASTP svg
NC_008686:14393281439328146928729960Paracoccus denitrificans PD1222 chromosome 1, complete sequence1e-37167BLASTN svgBLASTP svg
NC_008254:53459053459055841423825Mesorhizobium sp. BNC1, complete genome2e-33153BLASTN svgBLASTP svg
NC_009720:33176423317642334276225121Xanthobacter autotrophicus Py2, complete genome4e-31145BLASTN svgBLASTP svg
NC_009668:52917552917554876219588Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence1e-30143BLASTN svgBLASTP svg
NC_009937:43921084392108441736925262Azorhizobium caulinodans ORS 571, complete genome6e-30141BLASTN svgBLASTP svg
NC_009720:81315781315783515121995Xanthobacter autotrophicus Py2, complete genome6e-30141BLASTN svgBLASTP svg
NC_010338:41486674148667417175123085Caulobacter sp. K31, complete genome9e-26127BLASTN svgBLASTP svg
NC_010725:3273261*3273261329669423434Methylobacterium populi BJ001, complete genome2e-23119BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome3e-19105BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_009720:62226262226265580233541Xanthobacter autotrophicus Py2, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010625:16021911602191163439132201Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_008757:770237702310503328011Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete2e-0869.9BLASTN svgBLASTP svg
NC_009668:445134*44513451474969616Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_009720:5046861*5046861507080323943Xanthobacter autotrophicus Py2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010125:74904*749049987524972Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010125:10114301011430103468823259Gluconacetobacter diazotrophicus PAl 5, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_015186:2931000*2931000296035629357Acidiphilium multivorum AIU301, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014217:29874502987450301014422695Starkeya novella DSM 506 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010001:615427*61542763829122865Clostridium phytofermentans ISDg, complete genome4e-0661.9BLASTN svgBLASTP svg