Query: NC_017249:2109843 Bradyrhizobium japonicum USDA 6, complete genome
Start: 2109843, End: 2146612, Length: 36770
Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004463:1772541 | 1772541 | 1797099 | 24559 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 3081 | BLASTN svg | BLASTP svg |
NC_009720:750612 | 750612 | 784223 | 33612 | Xanthobacter autotrophicus Py2, complete genome | 5e-52 | 214 | BLASTN svg | BLASTP svg |
NC_010725:3315007 | 3315007 | 3342713 | 27707 | Methylobacterium populi BJ001, complete genome | 2e-51 | 212 | BLASTN svg | BLASTP svg |
NC_007925:3911323 | 3911323 | 3933151 | 21829 | Rhodopseudomonas palustris BisB18, complete genome | 1e-40 | 176 | BLASTN svg | BLASTP svg |
NC_008686:1439328 | 1439328 | 1469287 | 29960 | Paracoccus denitrificans PD1222 chromosome 1, complete sequence | 1e-37 | 167 | BLASTN svg | BLASTP svg |
NC_008254:534590 | 534590 | 558414 | 23825 | Mesorhizobium sp. BNC1, complete genome | 2e-33 | 153 | BLASTN svg | BLASTP svg |
NC_009720:3317642 | 3317642 | 3342762 | 25121 | Xanthobacter autotrophicus Py2, complete genome | 4e-31 | 145 | BLASTN svg | BLASTP svg |
NC_009668:529175 | 529175 | 548762 | 19588 | Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence | 1e-30 | 143 | BLASTN svg | BLASTP svg |
NC_009937:4392108 | 4392108 | 4417369 | 25262 | Azorhizobium caulinodans ORS 571, complete genome | 6e-30 | 141 | BLASTN svg | BLASTP svg |
NC_009720:813157 | 813157 | 835151 | 21995 | Xanthobacter autotrophicus Py2, complete genome | 6e-30 | 141 | BLASTN svg | BLASTP svg |
NC_010338:4148667 | 4148667 | 4171751 | 23085 | Caulobacter sp. K31, complete genome | 9e-26 | 127 | BLASTN svg | BLASTP svg |
NC_010725:3273261* | 3273261 | 3296694 | 23434 | Methylobacterium populi BJ001, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
NC_009720:670853 | 670853 | 691974 | 21122 | Xanthobacter autotrophicus Py2, complete genome | 3e-19 | 105 | BLASTN svg | BLASTP svg |
NC_009720:4406991 | 4406991 | 4447916 | 40926 | Xanthobacter autotrophicus Py2, complete genome | 8e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010002:2933909 | 2933909 | 2972504 | 38596 | Delftia acidovorans SPH-1, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009720:622262 | 622262 | 655802 | 33541 | Xanthobacter autotrophicus Py2, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010625:1602191 | 1602191 | 1634391 | 32201 | Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_008757:77023 | 77023 | 105033 | 28011 | Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009668:445134* | 445134 | 514749 | 69616 | Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009720:5046861* | 5046861 | 5070803 | 23943 | Xanthobacter autotrophicus Py2, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010125:74904* | 74904 | 99875 | 24972 | Gluconacetobacter diazotrophicus PAl 5, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015422:1643000* | 1643000 | 1665476 | 22477 | Alicycliphilus denitrificans K601 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_010125:1011430 | 1011430 | 1034688 | 23259 | Gluconacetobacter diazotrophicus PAl 5, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_008577:1489643 | 1489643 | 1516514 | 26872 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_015186:2931000* | 2931000 | 2960356 | 29357 | Acidiphilium multivorum AIU301, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014217:2987450 | 2987450 | 3010144 | 22695 | Starkeya novella DSM 506 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010001:615427* | 615427 | 638291 | 22865 | Clostridium phytofermentans ISDg, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |