Pre_GI: BLASTN Hits

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Query: NC_017221:73864 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Start: 73864, End: 93354, Length: 19491

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome010230BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome010130BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome04716BLASTN svgBLASTP svg
NC_013714:22943422294342232581731476Bifidobacterium dentium Bd1, complete genome5e-35157BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome1e-23119BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome4e-20107BLASTN svgBLASTP svg