Query: NC_017219:1203500 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome
Start: 1203500, End: 1230099, Length: 26600
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015067:2136048 | 2136048 | 2168969 | 32922 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 0 | 743 | BLASTN svg | BLASTP svg |
NC_015067:1528984* | 1528984 | 1561878 | 32895 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 2e-60 | 242 | BLASTN svg | BLASTP svg |
NC_015052:2071759* | 2071759 | 2093633 | 21875 | Bifidobacterium longum subsp. infantis 157F, complete genome | 8e-47 | 196 | BLASTN svg | BLASTP svg |
NC_015067:2032271* | 2032271 | 2054099 | 21829 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
NC_004307:1936725* | 1936725 | 1958907 | 22183 | Bifidobacterium longum NCC2705, complete genome | 7e-32 | 147 | BLASTN svg | BLASTP svg |
NC_018720:993869* | 993869 | 1021599 | 27731 | Bifidobacterium asteroides PRL2011 chromosome, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
NC_013721:1091901* | 1091901 | 1114099 | 22199 | Gardnerella vaginalis 409-05, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_012590:1950154* | 1950154 | 1990745 | 40592 | Corynebacterium aurimucosum ATCC 700975, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_013235:2129982* | 2129982 | 2172185 | 42204 | Nakamurella multipartita DSM 44233, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015052:1313311* | 1313311 | 1351678 | 38368 | Bifidobacterium longum subsp. infantis 157F, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008025:430487* | 430487 | 457484 | 26998 | Deinococcus geothermalis DSM 11300, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010816:1989868* | 1989868 | 2011735 | 21868 | Bifidobacterium longum DJO10A, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015846:67603* | 67603 | 91020 | 23418 | Capnocytophaga canimorsus Cc5 chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |