Pre_GI: BLASTN Hits

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Query: NC_017219:1203500 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 1203500, End: 1230099, Length: 26600

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome0743BLASTN svgBLASTP svg
NC_015067:1528984*1528984156187832895Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-60242BLASTN svgBLASTP svg
NC_015052:2071759*2071759209363321875Bifidobacterium longum subsp. infantis 157F, complete genome8e-47196BLASTN svgBLASTP svg
NC_015067:2032271*2032271205409921829Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-41178BLASTN svgBLASTP svg
NC_004307:1936725*1936725195890722183Bifidobacterium longum NCC2705, complete genome7e-32147BLASTN svgBLASTP svg
NC_018720:993869*993869102159927731Bifidobacterium asteroides PRL2011 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_013721:1091901*1091901111409922199Gardnerella vaginalis 409-05, complete genome1e-21113BLASTN svgBLASTP svg
NC_012590:1950154*1950154199074540592Corynebacterium aurimucosum ATCC 700975, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013235:2129982*2129982217218542204Nakamurella multipartita DSM 44233, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015052:1313311*1313311135167838368Bifidobacterium longum subsp. infantis 157F, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008025:430487*43048745748426998Deinococcus geothermalis DSM 11300, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010816:1989868*1989868201173521868Bifidobacterium longum DJO10A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015846:67603*676039102023418Capnocytophaga canimorsus Cc5 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg