Pre_GI: BLASTN Hits

Query: NC_016842:949899 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 949899, End: 967922, Length: 18024

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.

Search Results with any or all of these Fields

*Host Accession, e.g.* NC_0123..**	*Host Description, e.g.* Clostri...**

*Host Lineage, e.g.* archae, Proteo, Firmi...**

*Host Information, e.g.* soil, Thermo, Russia**

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject Island	Start	End	Length	Subject Host Description	Bit score	Visual BLASTN	Visual BLASTP
NC_010741:949732*	949732	971742	22011	Treponema pallidum subsp. pallidum SS14, complete genome	23290	BLASTN svg	BLASTP svg
NC_000919:948287*	948287	970297	22011	Treponema pallidum subsp. pallidum str. Nichols, complete genome	23270	BLASTN svg	BLASTP svg
NC_015714:943178*	943178	961201	18024	Treponema paraluiscuniculi Cuniculi A chromosome, complete genome	22900	BLASTN svg	BLASTP svg