Pre_GI: BLASTN Hits

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Query: NC_015957:7533000 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 7533000, End: 7551532, Length: 18533

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome0737BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome0654BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome0644BLASTN svgBLASTP svg
NC_009921:41860004186000420611220113Frankia sp. EAN1pec, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_003888:21174821174823351821771Streptomyces coelicolor A3(2), complete genome9e-0969.9BLASTN svgBLASTP svg
NC_019673:35820043582004360487622873Saccharothrix espanaensis DSM 44229 complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010338:359940*35994038393423995Caulobacter sp. K31, complete genome9e-0660BLASTN svgBLASTP svg