Pre_GI: BLASTN Hits

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Query: NC_013929:4927380 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4927380, End: 4947569, Length: 20190

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:5443230*5443230546350520276Streptomyces avermitilis MA-4680, complete genome0938BLASTN svgBLASTP svg
NC_018750:76530007653000767667323674Streptomyces venezuelae ATCC 10712, complete genome7e-22113BLASTN svgBLASTP svg
NC_015953:26405002640500266269222193Streptomyces sp. SirexAA-E chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015711:6266432*6266432630778741356Myxococcus fulvus HW-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010162:95024809502480953339230913Sorangium cellulosum 'So ce 56', complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008463:4867504*4867504489101123508Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014391:26513152651315269455543241Micromonospora aurantiaca ATCC 27029 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_009142:28015172801517283231830802Saccharopolyspora erythraea NRRL 2338, complete genome9e-0660BLASTN svgBLASTP svg