Query: NC_013929:4927380 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 4927380, End: 4947569, Length: 20190
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_003155:5443230* | 5443230 | 5463505 | 20276 | Streptomyces avermitilis MA-4680, complete genome | 0 | 938 | BLASTN svg | BLASTP svg |
NC_018750:7653000 | 7653000 | 7676673 | 23674 | Streptomyces venezuelae ATCC 10712, complete genome | 7e-22 | 113 | BLASTN svg | BLASTP svg |
NC_015953:2640500 | 2640500 | 2662692 | 22193 | Streptomyces sp. SirexAA-E chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012721:1635999 | 1635999 | 1669220 | 33222 | Burkholderia glumae BGR1 chromosome 2, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_020453:1084238 | 1084238 | 1144897 | 60660 | Agromonas oligotrophica S58 DNA, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_020453:1072979 | 1072979 | 1120471 | 47493 | Agromonas oligotrophica S58 DNA, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015711:6266432* | 6266432 | 6307787 | 41356 | Myxococcus fulvus HW-1 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014659:4299552* | 4299552 | 4343310 | 43759 | Rhodococcus equi 103S, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010162:9502480 | 9502480 | 9533392 | 30913 | Sorangium cellulosum 'So ce 56', complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008463:4867504* | 4867504 | 4891011 | 23508 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015957:6119346 | 6119346 | 6195900 | 76555 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015711:6796082* | 6796082 | 6842172 | 46091 | Myxococcus fulvus HW-1 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007651:2639553* | 2639553 | 2691724 | 52172 | Burkholderia thailandensis E264 chromosome I, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009921:3551036* | 3551036 | 3622359 | 71324 | Frankia sp. EAN1pec, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014391:2651315 | 2651315 | 2694555 | 43241 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009142:2801517 | 2801517 | 2832318 | 30802 | Saccharopolyspora erythraea NRRL 2338, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |