Query: NC_013315:3073652 Clostridium difficile CD196 chromosome, complete genome
Start: 3073652, End: 3095975, Length: 22324
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009089:3241918 | 3241918 | 3266755 | 24838 | Clostridium difficile 630, complete genome | 0 | 13020 | BLASTN svg | BLASTP svg |
| NC_013171:1336000* | 1336000 | 1358967 | 22968 | Anaerococcus prevotii DSM 20548, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_014614:2434017* | 2434017 | 2458067 | 24051 | Clostridium sticklandii, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_012039:480625* | 480625 | 505063 | 24439 | Campylobacter lari RM2100, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_011565:469962* | 469962 | 493763 | 23802 | Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2, | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_003909:4854379* | 4854379 | 4902415 | 48037 | Bacillus cereus ATCC 10987, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_006055:44649* | 44649 | 73446 | 28798 | Mesoplasma florum L1, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_011661:1411383* | 1411383 | 1433586 | 22204 | Dictyoglomus turgidum DSM 6724, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_011772:5021404* | 5021404 | 5063599 | 42196 | Bacillus cereus G9842, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015949:1957185* | 1957185 | 1978002 | 20818 | Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_011126:922182* | 922182 | 942298 | 20117 | Hydrogenobaculum sp. Y04AAS1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |