Pre_GI: BLASTN Hits

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Query: NC_012811:139498 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 139498, End: 162872, Length: 23375

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011757:1067543*1067543108613118589Methylobacterium chloromethanicum CM4, complete genome017530BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome0801BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome2e-146527BLASTN svgBLASTP svg
NC_011757:10914861091486111319221707Methylobacterium chloromethanicum CM4, complete genome2e-146527BLASTN svgBLASTP svg
NC_010725:356609*35660937730020692Methylobacterium populi BJ001, complete genome6e-146525BLASTN svgBLASTP svg
NC_010725:4035397*4035397410959974203Methylobacterium populi BJ001, complete genome6e-146525BLASTN svgBLASTP svg
NC_012811:959725*95972598359923875Methylobacterium extorquens AM1 megaplasmid, complete sequence1e-144521BLASTN svgBLASTP svg
NC_012811:11388971138897115709918203Methylobacterium extorquens AM1 megaplasmid, complete sequence2e-136494BLASTN svgBLASTP svg
NC_011757:42057944205794422846522672Methylobacterium chloromethanicum CM4, complete genome3e-74287BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome6e-26127BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome8e-19103BLASTN svgBLASTP svg
NC_008825:2525380*2525380255303327654Methylibium petroleiphilum PM1, complete genome3e-18101BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011894:6888562*6888562695715868597Methylobacterium nodulans ORS 2060, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete5e-1487.7BLASTN svgBLASTP svg
NC_010510:139685*13968516159921915Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete2e-1385.7BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete5e-1177.8BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011894:4911500*4911500493054819049Methylobacterium nodulans ORS 2060, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011894:67227067227069179519526Methylobacterium nodulans ORS 2060, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010510:339879*33987937475134873Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete1e-0869.9BLASTN svgBLASTP svg
NC_010505:50356685035668506954133874Methylobacterium radiotolerans JCM 2831, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013722:30814593081459310680725349Xanthomonas albilineans, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013722:14255881425588144909923512Xanthomonas albilineans, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011758:32636632636636071134346Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete2e-0765.9BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011891:4450031*4450031448061130581Anaeromyxobacter dehalogenans 2CP-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011894:62958076295807631464118835Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012724:20685882068588209611727530Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015684:23696512369651239009920449Oligotropha carboxidovorans OM5 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome3e-0661.9BLASTN svgBLASTP svg