Pre_GI: BLASTN Hits

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Query: NC_012490:4425456 Rhodococcus erythropolis PR4, complete genome

Start: 4425456, End: 4444484, Length: 19029

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014666:81985548198554822359925046Frankia sp. EuI1c chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010572:18728401872840190085328014Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_003888:73374537337453737640338951Streptomyces coelicolor A3(2), complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003155:22110872211087223044019354Streptomyces avermitilis MA-4680, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008268:17486351748635177239623762Rhodococcus sp. RHA1, complete genome2e-0661.9BLASTN svgBLASTP svg