Query: NC_012490:2660089 Rhodococcus erythropolis PR4, complete genome
Start: 2660089, End: 2687172, Length: 27084
Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012490:43000 | 43000 | 68478 | 25479 | Rhodococcus erythropolis PR4, complete genome | 0 | 5114 | BLASTN svg | BLASTP svg |
NC_015312:6398931 | 6398931 | 6417277 | 18347 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 2e-53 | 218 | BLASTN svg | BLASTP svg |
NC_013131:4525075* | 4525075 | 4549127 | 24053 | Catenulispora acidiphila DSM 44928, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
NC_015957:5182460 | 5182460 | 5221284 | 38825 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_012803:1302261 | 1302261 | 1323804 | 21544 | Micrococcus luteus NCTC 2665, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008268:7052202 | 7052202 | 7073099 | 20898 | Rhodococcus sp. RHA1, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015635:3542125* | 3542125 | 3567953 | 25829 | Microlunatus phosphovorus NM-1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015312:3675148* | 3675148 | 3746064 | 70917 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015312:2278566* | 2278566 | 2326808 | 48243 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015312:1265797* | 1265797 | 1336630 | 70834 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |