Query: NC_012466:2008000 Streptococcus pneumoniae JJA, complete genome
Start: 2008000, End: 2030117, Length: 22118
Host Lineage: Streptococcus pneumoniae; Streptococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria
General Information: This organism is a member of the normal human nasopharyngeal flora. There are more than 85 different antigenic types of S. pneumoniae, which are classified based on their capsule antigens. This organism is also the most common cause of sinusitis, acute bacterial otitis media, and conjunctivitis beyond early childhood. S. pneumoniae is also known to cause pneumonia, meningitis, and bacteremia. Streptococci are Gram-positive, non-motile, non-spore forming, catalase-negative cocci that occur in pairs or chains. Members of this genus vary widely in pathogenic potential. Most streptococci are facultative anaerobes, and some are obligate anaerobes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010582:2091138* | 2091138 | 2115370 | 24233 | Streptococcus pneumoniae CGSP14, complete genome | 0 | 15770 | BLASTN svg | BLASTP svg |
| NC_012467:1997484* | 1997484 | 2020193 | 22710 | Streptococcus pneumoniae P1031, complete genome | 0 | 15650 | BLASTN svg | BLASTP svg |
| NC_008533:1935500 | 1935500 | 1954119 | 18620 | Streptococcus pneumoniae D39, complete genome | 0 | 15400 | BLASTN svg | BLASTP svg |
| NC_003098:1925783 | 1925783 | 1948099 | 22317 | Streptococcus pneumoniae R6, complete genome | 0 | 15380 | BLASTN svg | BLASTP svg |
| NC_006448:5046* | 5046 | 31358 | 26313 | Streptococcus thermophilus LMG 18311, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
| NC_006449:5046* | 5046 | 31386 | 26341 | Streptococcus thermophilus CNRZ1066, complete genome | 4e-36 | 161 | BLASTN svg | BLASTP svg |
| NC_021175:2037219* | 2037219 | 2057099 | 19881 | Streptococcus oligofermentans AS 1.3089, complete genome | 9e-34 | 153 | BLASTN svg | BLASTP svg |
| NC_012466:1367099* | 1367099 | 1389599 | 22501 | Streptococcus pneumoniae JJA, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
| NC_008533:1380406* | 1380406 | 1405461 | 25056 | Streptococcus pneumoniae D39, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
| NC_003098:1372875* | 1372875 | 1397930 | 25056 | Streptococcus pneumoniae R6, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
| NC_010582:1771591 | 1771591 | 1796126 | 24536 | Streptococcus pneumoniae CGSP14, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_008533:592000* | 592000 | 614367 | 22368 | Streptococcus pneumoniae D39, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_015875:190041* | 190041 | 211161 | 21121 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 8e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_015875:646000* | 646000 | 669244 | 23245 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_021175:2063611* | 2063611 | 2088636 | 25026 | Streptococcus oligofermentans AS 1.3089, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_015875:1926981* | 1926981 | 1949413 | 22433 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
| NC_015875:1505034* | 1505034 | 1529978 | 24945 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_012469:1403412* | 1403412 | 1424843 | 21432 | Streptococcus pneumoniae Taiwan19F-14, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_012466:590883* | 590883 | 610682 | 19800 | Streptococcus pneumoniae JJA, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_003098:586941* | 586941 | 605116 | 18176 | Streptococcus pneumoniae R6, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_009009:219087* | 219087 | 238325 | 19239 | Streptococcus sanguinis SK36, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009785:387910* | 387910 | 410099 | 22190 | Streptococcus gordonii str. Challis substr. CH1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_013406:2207520* | 2207520 | 2232250 | 24731 | Paenibacillus sp. Y412MC10 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012471:1197534* | 1197534 | 1279535 | 82002 | Streptococcus equi subsp. equi 4047, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_012471:1752483 | 1752483 | 1771052 | 18570 | Streptococcus equi subsp. equi 4047, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_011134:311360 | 311360 | 338940 | 27581 | Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |