Pre_GI: BLASTN Hits

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Query: NC_012466:2008000 Streptococcus pneumoniae JJA, complete genome

Start: 2008000, End: 2030117, Length: 22118

Host Lineage: Streptococcus pneumoniae; Streptococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a member of the normal human nasopharyngeal flora. There are more than 85 different antigenic types of S. pneumoniae, which are classified based on their capsule antigens. This organism is also the most common cause of sinusitis, acute bacterial otitis media, and conjunctivitis beyond early childhood. S. pneumoniae is also known to cause pneumonia, meningitis, and bacteremia. Streptococci are Gram-positive, non-motile, non-spore forming, catalase-negative cocci that occur in pairs or chains. Members of this genus vary widely in pathogenic potential. Most streptococci are facultative anaerobes, and some are obligate anaerobes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010582:2091138*2091138211537024233Streptococcus pneumoniae CGSP14, complete genome015770BLASTN svgBLASTP svg
NC_012467:1997484*1997484202019322710Streptococcus pneumoniae P1031, complete genome015650BLASTN svgBLASTP svg
NC_008533:19355001935500195411918620Streptococcus pneumoniae D39, complete genome015400BLASTN svgBLASTP svg
NC_003098:19257831925783194809922317Streptococcus pneumoniae R6, complete genome015380BLASTN svgBLASTP svg
NC_006448:5046*50463135826313Streptococcus thermophilus LMG 18311, complete genome2e-38168BLASTN svgBLASTP svg
NC_006449:5046*50463138626341Streptococcus thermophilus CNRZ1066, complete genome4e-36161BLASTN svgBLASTP svg
NC_021175:2037219*2037219205709919881Streptococcus oligofermentans AS 1.3089, complete genome9e-34153BLASTN svgBLASTP svg
NC_012466:1367099*1367099138959922501Streptococcus pneumoniae JJA, complete genome2e-31145BLASTN svgBLASTP svg
NC_008533:1380406*1380406140546125056Streptococcus pneumoniae D39, complete genome5e-29137BLASTN svgBLASTP svg
NC_003098:1372875*1372875139793025056Streptococcus pneumoniae R6, complete genome5e-29137BLASTN svgBLASTP svg
NC_010582:17715911771591179612624536Streptococcus pneumoniae CGSP14, complete genome1e-23119BLASTN svgBLASTP svg
NC_008533:592000*59200061436722368Streptococcus pneumoniae D39, complete genome5e-23117BLASTN svgBLASTP svg
NC_015875:190041*19004121116121121Streptococcus pseudopneumoniae IS7493 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_015875:646000*64600066924423245Streptococcus pseudopneumoniae IS7493 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_021175:2063611*2063611208863625026Streptococcus oligofermentans AS 1.3089, complete genome1e-20109BLASTN svgBLASTP svg
NC_015875:1926981*1926981194941322433Streptococcus pseudopneumoniae IS7493 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_015875:1505034*1505034152997824945Streptococcus pseudopneumoniae IS7493 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012469:1403412*1403412142484321432Streptococcus pneumoniae Taiwan19F-14, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012466:590883*59088361068219800Streptococcus pneumoniae JJA, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003098:586941*58694160511618176Streptococcus pneumoniae R6, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009009:219087*21908723832519239Streptococcus sanguinis SK36, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009785:387910*38791041009922190Streptococcus gordonii str. Challis substr. CH1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013406:2207520*2207520223225024731Paenibacillus sp. Y412MC10 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012471:1197534*1197534127953582002Streptococcus equi subsp. equi 4047, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012471:17524831752483177105218570Streptococcus equi subsp. equi 4047, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011134:31136031136033894027581Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete3e-0661.9BLASTN svgBLASTP svg