Pre_GI: BLASTN Hits

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Query: NC_011769:2542000 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2542000, End: 2564099, Length: 22100

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007517:1468719*1468719150798939271Geobacter metallireducens GS-15, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008554:45865434586543461829531753Syntrophobacter fumaroxidans MPOB, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012560:18238611823861184283818978Azotobacter vinelandii DJ, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021150:18238741823874184285118978Azotobacter vinelandii CA6, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010655:37343737343740239028954Akkermansia muciniphila ATCC BAA-835, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015458:19388601938860196301624157Pusillimonas sp. T7-7 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014210:56836165683616570702223407Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_013235:1218378*1218378123891620539Nakamurella multipartita DSM 44233, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008726:38582093858209387826620058Mycobacterium vanbaalenii PYR-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012803:19809551980955200418223228Micrococcus luteus NCTC 2665, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015573:31672073167207318697119765Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008541:19312661931266195576724502Arthrobacter sp. FB24 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002939:20083042008304204522736924Geobacter sulfurreducens PCA, complete genome3e-0661.9BLASTN svgBLASTP svg