Query: NC_011769:2542000 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome
Start: 2542000, End: 2564099, Length: 22100
Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria
General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_007517:1468719* | 1468719 | 1507989 | 39271 | Geobacter metallireducens GS-15, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_014814:2588628* | 2588628 | 2647576 | 58949 | Mycobacterium sp. Spyr1 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013441:2788806 | 2788806 | 2822181 | 33376 | Gordonia bronchialis DSM 43247, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_008554:4586543 | 4586543 | 4618295 | 31753 | Syntrophobacter fumaroxidans MPOB, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_008146:1577604 | 1577604 | 1606756 | 29153 | Mycobacterium sp. MCS, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_008705:1557711 | 1557711 | 1610599 | 52889 | Mycobacterium sp. KMS, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_012560:1823861 | 1823861 | 1842838 | 18978 | Azotobacter vinelandii DJ, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015671:255808 | 255808 | 300924 | 45117 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_021150:1823874 | 1823874 | 1842851 | 18978 | Azotobacter vinelandii CA6, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_009439:918534 | 918534 | 942408 | 23875 | Pseudomonas mendocina ymp, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010655:373437 | 373437 | 402390 | 28954 | Akkermansia muciniphila ATCC BAA-835, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015458:1938860 | 1938860 | 1963016 | 24157 | Pusillimonas sp. T7-7 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014210:5683616 | 5683616 | 5707022 | 23407 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013235:1218378* | 1218378 | 1238916 | 20539 | Nakamurella multipartita DSM 44233, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008726:3858209 | 3858209 | 3878266 | 20058 | Mycobacterium vanbaalenii PYR-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012803:1980955 | 1980955 | 2004182 | 23228 | Micrococcus luteus NCTC 2665, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014831:1906691 | 1906691 | 1952387 | 45697 | Thermaerobacter marianensis DSM 12885 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015573:3167207 | 3167207 | 3186971 | 19765 | Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014761:1321187* | 1321187 | 1344599 | 23413 | Oceanithermus profundus DSM 14977 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008541:1931266 | 1931266 | 1955767 | 24502 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_002939:2008304 | 2008304 | 2045227 | 36924 | Geobacter sulfurreducens PCA, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |